Class to manage the MS raw data backend using the mzR R-package to parse the raw data.

Slots

file_path

File path to the raw MS file

header

Header of the raw MS file

runInfo

Experiment information from the raw MS file

intensity

numeric vector of the individual MS peak intensities

mz

numeric vector of the individual MS peak m/z values

scanidx

integer vector indicating last idx in intensity and mz for each scan

scanrate

Scans per second

scantime

Seconds per scan

nscan

Number of scans

backend

String defining the backend used (currently not used).