Class used to process an XIC and calculate peak characteristics

Class used to process the peaks found by XCMS. All smoothing and processing of a chromatogram is performed using this class.

Slots

id

integer value indicating which peak in the peak table is being processed.

xic

Raw XIC trace

d0

Smoothed XIC trace

d2

Smoothed second derivative of the XIC trace

st

Scantimes

param

cpcParam object holding the processing parameters

mzMeta

Metadata from the raw MS files

procParams

list containing processing parameters. (deprecated)

procData

list containing processing data.

procResults

list containing the processing results for peak id.

rawProcResults

list containing the raw processing results returned by process_chromatogram.

results

list containing calculated peak characteristics for peak id.